FISA's administration is carried out by the General Secretariat, which employs some xxxnumber staff members in Larisa, Hellas. At its head is the FISA Secretary General, who is responsible for implementing the decisions of the Executive Committee.

The Secretary General is also responsible for FISA's finances, international relations, the organisation of the FISA World Cup™, and other FISA Subbuteo competitions.

The General Secretariat is comprised of divisions dealing with development, competitions, Subbuteo administration, finance, business, personnel, services and communications.